Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Gm10175-201ENSMUST00000086013 645 ntBASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd4Q6PDQ2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Chd4Q6PDQ2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd4Q6PDQ2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Gm27646-201ENSMUST00000183989 110 ntBASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Chd4Q6PDQ2 Gm25911-201ENSMUST00000157621 56 ntBASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 AC154222.1-201ENSMUST00000223882 475 ntBASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.49■■□□□ 1.03
Chd4Q6PDQ2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Chd4Q6PDQ2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 Gm14494-201ENSMUST00000118786 435 ntBASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.47■■□□□ 1.03
Chd4Q6PDQ2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms