Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Srsf1Q6PDM2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srsf1Q6PDM2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srsf1Q6PDM2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Mir7023-201ENSMUST00000185093 64 ntBASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srsf1Q6PDM2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srsf1Q6PDM2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srsf1Q6PDM2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms