Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Smarcd3Q6P9Z1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd3Q6P9Z1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.21■□□□□ 0.02
Smarcd3Q6P9Z1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd3Q6P9Z1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd3Q6P9Z1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Gm20760-201ENSMUST00000179197 648 ntBASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Gm10698-201ENSMUST00000182663 604 ntBASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd3Q6P9Z1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd3Q6P9Z1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Gm10653-202ENSMUST00000139570 835 ntBASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd3Q6P9Z1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 319.4 ms