Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Olfr129-201ENSMUST00000122318 993 ntBASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgb4Q6P8W9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Gm27357-201ENSMUST00000183754 135 ntBASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgb4Q6P8W9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Gm11336-201ENSMUST00000118168 334 ntBASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Hmgb4Q6P8W9 Haglr-201ENSMUST00000100000 2085 ntBASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgb4Q6P8W9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgb4Q6P8W9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgb4Q6P8W9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Hmgb4Q6P8W9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.27■□□□□ 0.36
Hmgb4Q6P8W9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgb4Q6P8W9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgb4Q6P8W9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgb4Q6P8W9 Gm24589-201ENSMUST00000116692 94 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms