Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Gm17808-201ENSMUST00000200859 894 ntBASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Gm18421-201ENSMUST00000204122 625 ntBASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl3Q6P1Y1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Rtl3Q6P1Y1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtl3Q6P1Y1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtl3Q6P1Y1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtl3Q6P1Y1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Gm6623-201ENSMUST00000173570 544 ntBASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl3Q6P1Y1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl3Q6P1Y1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Gm28033-201ENSMUST00000184224 96 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms