Protein–RNA interactions for Protein: Q6NZF1

Zc3h11a, Zinc finger CCCH domain-containing protein 11A, mousemouse

Known RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h11aQ6NZF1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3h11aQ6NZF1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3h11aQ6NZF1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3h11aQ6NZF1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3h11aQ6NZF1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.16■□□□□ 0.18
Zc3h11aQ6NZF1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Zc3h11aQ6NZF1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.16■□□□□ 0.18
Zc3h11aQ6NZF1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3h11aQ6NZF1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Gm18115-201ENSMUST00000221209 621 ntBASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h11aQ6NZF1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Zc3h11aQ6NZF1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Zc3h11aQ6NZF1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Gm10013-201ENSMUST00000106074 672 ntBASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Zc3h11aQ6NZF1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h11aQ6NZF1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h11aQ6NZF1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h11aQ6NZF1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms