Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.41■□□□□ 0.7
Krt40Q6IFX3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.4■□□□□ 0.7
Krt40Q6IFX3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt40Q6IFX3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Krt40Q6IFX3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Gm28659-201ENSMUST00000188013 759 ntBASIC19.39■□□□□ 0.69
Krt40Q6IFX3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.39■□□□□ 0.69
Krt40Q6IFX3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Gm5864-201ENSMUST00000202263 970 ntBASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt40Q6IFX3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Mir8098-201ENSMUST00000184011 137 ntBASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms