Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Clcn1Q64347 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.88■□□□□ 0.93
Clcn1Q64347 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.88■□□□□ 0.93
Clcn1Q64347 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Clcn1Q64347 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.87■□□□□ 0.93
Clcn1Q64347 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.87■□□□□ 0.93
Clcn1Q64347 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn1Q64347 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.87■□□□□ 0.93
Clcn1Q64347 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.86■□□□□ 0.93
Clcn1Q64347 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clcn1Q64347 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clcn1Q64347 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Clcn1Q64347 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn1Q64347 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn1Q64347 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn1Q64347 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn1Q64347 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn1Q64347 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn1Q64347 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.85■□□□□ 0.93
Clcn1Q64347 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn1Q64347 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.85■□□□□ 0.93
Clcn1Q64347 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Clcn1Q64347 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn1Q64347 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Clcn1Q64347 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Clcn1Q64347 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Clcn1Q64347 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn1Q64347 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn1Q64347 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn1Q64347 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.84■□□□□ 0.93
Clcn1Q64347 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn1Q64347 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.84■□□□□ 0.93
Clcn1Q64347 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn1Q64347 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn1Q64347 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Clcn1Q64347 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn1Q64347 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn1Q64347 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn1Q64347 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn1Q64347 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn1Q64347 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn1Q64347 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn1Q64347 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.83■□□□□ 0.93
Clcn1Q64347 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.83■□□□□ 0.93
Clcn1Q64347 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.83■□□□□ 0.93
Clcn1Q64347 Gm44430-201ENSMUST00000203376 995 ntBASIC20.83■□□□□ 0.93
Clcn1Q64347 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Clcn1Q64347 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn1Q64347 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn1Q64347 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn1Q64347 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn1Q64347 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn1Q64347 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.83■□□□□ 0.92
Clcn1Q64347 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Gm12350-201ENSMUST00000121208 462 ntBASIC20.82■□□□□ 0.92
Clcn1Q64347 Gm11594-201ENSMUST00000122313 162 ntBASIC20.82■□□□□ 0.92
Clcn1Q64347 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Clcn1Q64347 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.82■□□□□ 0.92
Clcn1Q64347 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn1Q64347 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms