Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.96■□□□□ 0.31
Six1Q62231 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.96■□□□□ 0.31
Six1Q62231 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.96■□□□□ 0.31
Six1Q62231 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.96■□□□□ 0.31
Six1Q62231 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Six1Q62231 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Six1Q62231 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Six1Q62231 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six1Q62231 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Six1Q62231 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Six1Q62231 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.96■□□□□ 0.3
Six1Q62231 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
Six1Q62231 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Six1Q62231 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Six1Q62231 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Six1Q62231 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Six1Q62231 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Six1Q62231 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.95■□□□□ 0.3
Six1Q62231 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.95■□□□□ 0.3
Six1Q62231 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Six1Q62231 Gm27463-201ENSMUST00000183569 57 ntBASIC16.95■□□□□ 0.3
Six1Q62231 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.95■□□□□ 0.3
Six1Q62231 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.95■□□□□ 0.3
Six1Q62231 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Six1Q62231 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six1Q62231 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Six1Q62231 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Six1Q62231 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Six1Q62231 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Six1Q62231 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Six1Q62231 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Six1Q62231 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Six1Q62231 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six1Q62231 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.93■□□□□ 0.3
Six1Q62231 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six1Q62231 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms