Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa2Q62193 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.21■□□□□ 0.03
Rpa2Q62193 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpa2Q62193 Gm27389-201ENSMUST00000183622 195 ntBASIC15.21■□□□□ 0.03
Rpa2Q62193 Mir1668-201ENSMUST00000184114 107 ntBASIC15.21■□□□□ 0.03
Rpa2Q62193 Gm21559-201ENSMUST00000220638 855 ntBASIC15.21■□□□□ 0.03
Rpa2Q62193 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa2Q62193 Gm8587-201ENSMUST00000076538 843 ntBASIC15.21■□□□□ 0.03
Rpa2Q62193 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa2Q62193 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa2Q62193 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa2Q62193 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpa2Q62193 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa2Q62193 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rpa2Q62193 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa2Q62193 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa2Q62193 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa2Q62193 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa2Q62193 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa2Q62193 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa2Q62193 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rpa2Q62193 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rpa2Q62193 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpa2Q62193 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Rpa2Q62193 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpa2Q62193 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rpa2Q62193 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rpa2Q62193 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa2Q62193 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Rpa2Q62193 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Rpa2Q62193 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa2Q62193 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Rpa2Q62193 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.18■□□□□ 0.02
Rpa2Q62193 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Gm10013-201ENSMUST00000106074 672 ntBASIC15.18■□□□□ 0.02
Rpa2Q62193 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Rpa2Q62193 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Rpa2Q62193 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Gm13186-201ENSMUST00000118031 316 ntBASIC15.18■□□□□ 0.02
Rpa2Q62193 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.18■□□□□ 0.02
Rpa2Q62193 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.18■□□□□ 0.02
Rpa2Q62193 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rpa2Q62193 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms