Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rai1Q61818 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.89■□□□□ 0.13
Rai1Q61818 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rai1Q61818 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.89■□□□□ 0.13
Rai1Q61818 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Gm43575-201ENSMUST00000196420 516 ntBASIC15.89■□□□□ 0.13
Rai1Q61818 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.89■□□□□ 0.13
Rai1Q61818 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.89■□□□□ 0.13
Rai1Q61818 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.89■□□□□ 0.13
Rai1Q61818 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Rai1Q61818 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rai1Q61818 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Rai1Q61818 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rai1Q61818 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.88■□□□□ 0.13
Rai1Q61818 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.88■□□□□ 0.13
Rai1Q61818 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Gm27628-201ENSMUST00000184911 107 ntBASIC15.88■□□□□ 0.13
Rai1Q61818 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.88■□□□□ 0.13
Rai1Q61818 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.88■□□□□ 0.13
Rai1Q61818 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rai1Q61818 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rai1Q61818 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.88■□□□□ 0.13
Rai1Q61818 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rai1Q61818 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.88■□□□□ 0.13
Rai1Q61818 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rai1Q61818 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rai1Q61818 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rai1Q61818 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.87■□□□□ 0.13
Rai1Q61818 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.87■□□□□ 0.13
Rai1Q61818 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.87■□□□□ 0.13
Rai1Q61818 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rai1Q61818 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rai1Q61818 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rai1Q61818 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.86■□□□□ 0.13
Rai1Q61818 Gm14822-201ENSMUST00000122247 291 ntBASIC15.86■□□□□ 0.13
Rai1Q61818 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rai1Q61818 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rai1Q61818 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rai1Q61818 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rai1Q61818 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rai1Q61818 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rai1Q61818 Gm23935-201ENSMUST00000102303 57 ntBASIC15.86■□□□□ 0.13
Rai1Q61818 Gm24270-201ENSMUST00000102326 57 ntBASIC15.86■□□□□ 0.13
Rai1Q61818 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rai1Q61818 Gm24245-201ENSMUST00000157318 57 ntBASIC15.86■□□□□ 0.13
Rai1Q61818 Gm6736-201ENSMUST00000166583 948 ntBASIC15.86■□□□□ 0.13
Rai1Q61818 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rai1Q61818 Gm2756-201ENSMUST00000195851 400 ntBASIC15.86■□□□□ 0.13
Rai1Q61818 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.86■□□□□ 0.13
Rai1Q61818 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rai1Q61818 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.85■□□□□ 0.13
Rai1Q61818 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rai1Q61818 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.85■□□□□ 0.13
Rai1Q61818 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms