Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Foxn1Q61575 Gm4459-201ENSMUST00000118750 468 ntBASIC18.85■□□□□ 0.61
Foxn1Q61575 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.85■□□□□ 0.61
Foxn1Q61575 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxn1Q61575 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Foxn1Q61575 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Foxn1Q61575 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Foxn1Q61575 Gm5745-201ENSMUST00000183748 313 ntBASIC18.84■□□□□ 0.61
Foxn1Q61575 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.84■□□□□ 0.61
Foxn1Q61575 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Foxn1Q61575 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Foxn1Q61575 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Foxn1Q61575 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxn1Q61575 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Foxn1Q61575 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxn1Q61575 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.83■□□□□ 0.6
Foxn1Q61575 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Gm13616-201ENSMUST00000120600 222 ntBASIC18.83■□□□□ 0.6
Foxn1Q61575 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Foxn1Q61575 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.83■□□□□ 0.6
Foxn1Q61575 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Foxn1Q61575 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxn1Q61575 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxn1Q61575 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Foxn1Q61575 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Foxn1Q61575 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.82■□□□□ 0.6
Foxn1Q61575 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxn1Q61575 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Foxn1Q61575 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.82■□□□□ 0.6
Foxn1Q61575 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxn1Q61575 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxn1Q61575 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.82■□□□□ 0.6
Foxn1Q61575 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxn1Q61575 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxn1Q61575 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Foxn1Q61575 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxn1Q61575 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxn1Q61575 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Foxn1Q61575 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Foxn1Q61575 Grk6-206ENSMUST00000224995 2971 ntBASIC18.81■□□□□ 0.6
Foxn1Q61575 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxn1Q61575 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxn1Q61575 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxn1Q61575 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxn1Q61575 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxn1Q61575 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.81■□□□□ 0.6
Foxn1Q61575 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxn1Q61575 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Foxn1Q61575 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxn1Q61575 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.81■□□□□ 0.6
Foxn1Q61575 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.81■□□□□ 0.6
Foxn1Q61575 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.81■□□□□ 0.6
Foxn1Q61575 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.81■□□□□ 0.6
Foxn1Q61575 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxn1Q61575 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.81■□□□□ 0.6
Foxn1Q61575 Gm20949-201ENSMUST00000206478 952 ntBASIC18.81■□□□□ 0.6
Foxn1Q61575 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms