Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.21□□□□□ -0.13
Clns1aQ61189 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clns1aQ61189 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clns1aQ61189 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clns1aQ61189 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clns1aQ61189 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clns1aQ61189 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clns1aQ61189 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Clns1aQ61189 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clns1aQ61189 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clns1aQ61189 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clns1aQ61189 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clns1aQ61189 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clns1aQ61189 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Clns1aQ61189 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.2□□□□□ -0.14
Clns1aQ61189 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.2□□□□□ -0.14
Clns1aQ61189 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clns1aQ61189 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.2□□□□□ -0.14
Clns1aQ61189 Gm18671-201ENSMUST00000214826 683 ntBASIC14.2□□□□□ -0.14
Clns1aQ61189 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Clns1aQ61189 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clns1aQ61189 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Clns1aQ61189 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.19□□□□□ -0.14
Clns1aQ61189 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Gm11927-201ENSMUST00000118472 759 ntBASIC14.19□□□□□ -0.14
Clns1aQ61189 Gm6576-201ENSMUST00000169678 883 ntBASIC14.19□□□□□ -0.14
Clns1aQ61189 Mir6349-201ENSMUST00000184059 97 ntBASIC14.19□□□□□ -0.14
Clns1aQ61189 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clns1aQ61189 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clns1aQ61189 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Clns1aQ61189 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Clns1aQ61189 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clns1aQ61189 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.18□□□□□ -0.14
Clns1aQ61189 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.18□□□□□ -0.14
Clns1aQ61189 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clns1aQ61189 Gm10033-202ENSMUST00000211874 928 ntBASIC14.18□□□□□ -0.14
Clns1aQ61189 Mtag2-201ENSMUST00000058665 714 ntBASIC14.18□□□□□ -0.14
Clns1aQ61189 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Clns1aQ61189 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clns1aQ61189 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clns1aQ61189 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clns1aQ61189 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Clns1aQ61189 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.17□□□□□ -0.14
Clns1aQ61189 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms