Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a4Q60857 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a4Q60857 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a4Q60857 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Gm12895-201ENSMUST00000122214 226 ntBASIC16.9■□□□□ 0.3
Slc6a4Q60857 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.9■□□□□ 0.3
Slc6a4Q60857 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.9■□□□□ 0.3
Slc6a4Q60857 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a4Q60857 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Slc6a4Q60857 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Slc6a4Q60857 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.89■□□□□ 0.29
Slc6a4Q60857 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.89■□□□□ 0.29
Slc6a4Q60857 Gm34391-201ENSMUST00000203706 907 ntBASIC16.89■□□□□ 0.29
Slc6a4Q60857 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Slc6a4Q60857 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Gm24589-201ENSMUST00000116692 94 ntBASIC16.88■□□□□ 0.29
Slc6a4Q60857 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.88■□□□□ 0.29
Slc6a4Q60857 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a4Q60857 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Gm7153-201ENSMUST00000117092 455 ntBASIC16.87■□□□□ 0.29
Slc6a4Q60857 Gm13312-201ENSMUST00000119631 718 ntBASIC16.87■□□□□ 0.29
Slc6a4Q60857 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms