Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.3■□□□□ 0.2
Col12a1Q60847 Gm7222-201ENSMUST00000117512 906 ntBASIC16.3■□□□□ 0.2
Col12a1Q60847 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.3■□□□□ 0.2
Col12a1Q60847 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.3■□□□□ 0.2
Col12a1Q60847 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col12a1Q60847 Gm2423-201ENSMUST00000074863 733 ntBASIC16.3■□□□□ 0.2
Col12a1Q60847 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col12a1Q60847 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.3■□□□□ 0.2
Col12a1Q60847 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col12a1Q60847 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.3■□□□□ 0.2
Col12a1Q60847 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.3■□□□□ 0.2
Col12a1Q60847 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col12a1Q60847 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.29■□□□□ 0.2
Col12a1Q60847 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Col12a1Q60847 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Col12a1Q60847 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col12a1Q60847 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col12a1Q60847 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col12a1Q60847 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.29■□□□□ 0.2
Col12a1Q60847 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Col12a1Q60847 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col12a1Q60847 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col12a1Q60847 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.28■□□□□ 0.2
Col12a1Q60847 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.28■□□□□ 0.2
Col12a1Q60847 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col12a1Q60847 Gm4899-201ENSMUST00000178708 719 ntBASIC16.28■□□□□ 0.2
Col12a1Q60847 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col12a1Q60847 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col12a1Q60847 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col12a1Q60847 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col12a1Q60847 Gm13597-201ENSMUST00000121239 375 ntBASIC16.27■□□□□ 0.2
Col12a1Q60847 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col12a1Q60847 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col12a1Q60847 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col12a1Q60847 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col12a1Q60847 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col12a1Q60847 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col12a1Q60847 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Col12a1Q60847 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col12a1Q60847 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col12a1Q60847 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Col12a1Q60847 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.27■□□□□ 0.19
Col12a1Q60847 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col12a1Q60847 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col12a1Q60847 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col12a1Q60847 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col12a1Q60847 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col12a1Q60847 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
Col12a1Q60847 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.26■□□□□ 0.19
Col12a1Q60847 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col12a1Q60847 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Col12a1Q60847 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Col12a1Q60847 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col12a1Q60847 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.25■□□□□ 0.19
Col12a1Q60847 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 Gm8825-201ENSMUST00000182565 998 ntBASIC16.25■□□□□ 0.19
Col12a1Q60847 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.25■□□□□ 0.19
Col12a1Q60847 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.25■□□□□ 0.19
Col12a1Q60847 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col12a1Q60847 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Col12a1Q60847 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.24■□□□□ 0.19
Col12a1Q60847 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.24■□□□□ 0.19
Col12a1Q60847 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms