Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf1Q5U4C3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf1Q5U4C3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf1Q5U4C3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf1Q5U4C3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Scaf1Q5U4C3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scaf1Q5U4C3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf1Q5U4C3 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Psmb5-202ENSMUST00000227257 622 ntBASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf1Q5U4C3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Gm8097-201ENSMUST00000117903 829 ntBASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Gm37935-201ENSMUST00000192012 982 ntBASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Scaf1Q5U4C3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Scaf1Q5U4C3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf1Q5U4C3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Gm11764-201ENSMUST00000120221 623 ntBASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf1Q5U4C3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gm7222-201ENSMUST00000117512 906 ntBASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
Scaf1Q5U4C3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf1Q5U4C3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf1Q5U4C3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf1Q5U4C3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf1Q5U4C3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.48■■□□□ 1.03
Scaf1Q5U4C3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Scaf1Q5U4C3 Gm6550-201ENSMUST00000187574 993 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms