Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr3Q5U430 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr3Q5U430 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr3Q5U430 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr3Q5U430 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20■□□□□ 0.79
Ubr3Q5U430 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr3Q5U430 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr3Q5U430 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Gm27494-201ENSMUST00000184735 189 ntBASIC19.99■□□□□ 0.79
Ubr3Q5U430 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.99■□□□□ 0.79
Ubr3Q5U430 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.99■□□□□ 0.79
Ubr3Q5U430 Gm4899-201ENSMUST00000178708 719 ntBASIC19.99■□□□□ 0.79
Ubr3Q5U430 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr3Q5U430 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.98■□□□□ 0.79
Ubr3Q5U430 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Ubr3Q5U430 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Gm11025-201ENSMUST00000140773 466 ntBASIC19.97■□□□□ 0.79
Ubr3Q5U430 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.97■□□□□ 0.79
Ubr3Q5U430 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr3Q5U430 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.96■□□□□ 0.79
Ubr3Q5U430 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Gm45167-201ENSMUST00000208007 322 ntBASIC19.96■□□□□ 0.79
Ubr3Q5U430 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Gm44492-201ENSMUST00000197012 141 ntBASIC19.96■□□□□ 0.79
Ubr3Q5U430 Gm5312-201ENSMUST00000203728 547 ntBASIC19.96■□□□□ 0.79
Ubr3Q5U430 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr3Q5U430 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.95■□□□□ 0.78
Ubr3Q5U430 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr3Q5U430 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.95■□□□□ 0.78
Ubr3Q5U430 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.95■□□□□ 0.78
Ubr3Q5U430 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ubr3Q5U430 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr3Q5U430 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr3Q5U430 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr3Q5U430 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.95■□□□□ 0.78
Ubr3Q5U430 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr3Q5U430 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr3Q5U430 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Gm18622-201ENSMUST00000219361 595 ntBASIC19.94■□□□□ 0.78
Ubr3Q5U430 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ubr3Q5U430 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms