Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3-1Q5R1I8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3-1Q5R1I8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Gm8503-201ENSMUST00000118131 455 ntBASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3-1Q5R1I8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3-1Q5R1I8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms