Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav7d-3Q5R1I1 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-3Q5R1I1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Gm12085-201ENSMUST00000119263 940 ntBASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Gm7638-201ENSMUST00000121348 967 ntBASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Gm38027-201ENSMUST00000192315 235 ntBASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Il3ra-202ENSMUST00000223589 738 ntBASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-3Q5R1I1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trav7d-3Q5R1I1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms