Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Gm13234-201ENSMUST00000120010 747 ntBASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav7d-4Q5R1H9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Asic1-205ENSMUST00000228185 1818 ntBASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav7d-4Q5R1H9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Gm6139-201ENSMUST00000079261 882 ntBASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Zfp783-201ENSMUST00000095946 670 ntBASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav7d-4Q5R1H9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav7d-4Q5R1H9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav7d-4Q5R1H9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav7d-4Q5R1H9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-4Q5R1H9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms