Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-3Q5R1C3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-3Q5R1C3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-3Q5R1C3 Idnk-204ENSMUST00000226010 1898 ntBASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Gm9988-201ENSMUST00000069786 435 ntBASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-3Q5R1C3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms