Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Gm27867-201ENSMUST00000184778 125 ntBASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf43Q5NCP0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Mir5131-201ENSMUST00000175426 93 ntBASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf43Q5NCP0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Gm12350-201ENSMUST00000121208 462 ntBASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Gm10060-201ENSMUST00000212002 111 ntBASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf43Q5NCP0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms