Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps13aQ5H8C4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Gm14127-201ENSMUST00000117906 678 ntBASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Mir7023-201ENSMUST00000185093 64 ntBASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Gm29707-201ENSMUST00000196325 491 ntBASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Gm44492-201ENSMUST00000197012 141 ntBASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps13aQ5H8C4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.33■□□□□ 0.21
Vps13aQ5H8C4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Vps13aQ5H8C4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vps13aQ5H8C4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vps13aQ5H8C4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps13aQ5H8C4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps13aQ5H8C4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Vps13aQ5H8C4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps13aQ5H8C4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.33■□□□□ 0.2
Vps13aQ5H8C4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps13aQ5H8C4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.33■□□□□ 0.2
Vps13aQ5H8C4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps13aQ5H8C4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps13aQ5H8C4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps13aQ5H8C4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps13aQ5H8C4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Gm27494-201ENSMUST00000184735 189 ntBASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms