Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scn2bQ56A07 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Scn2bQ56A07 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Gm38027-201ENSMUST00000192315 235 ntBASIC16.39■□□□□ 0.21
Scn2bQ56A07 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.39■□□□□ 0.21
Scn2bQ56A07 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn2bQ56A07 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.38■□□□□ 0.21
Scn2bQ56A07 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.38■□□□□ 0.21
Scn2bQ56A07 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn2bQ56A07 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn2bQ56A07 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Scn2bQ56A07 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.37■□□□□ 0.21
Scn2bQ56A07 Il3ra-202ENSMUST00000223589 738 ntBASIC16.37■□□□□ 0.21
Scn2bQ56A07 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn2bQ56A07 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2bQ56A07 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn2bQ56A07 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn2bQ56A07 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.36■□□□□ 0.21
Scn2bQ56A07 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms