Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Gm27702-201ENSMUST00000184512 56 ntBASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx49Q4FZF3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Gm44430-201ENSMUST00000203376 995 ntBASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx49Q4FZF3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx49Q4FZF3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx49Q4FZF3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx49Q4FZF3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx49Q4FZF3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.14■□□□□ 0.66
Ddx49Q4FZF3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx49Q4FZF3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx49Q4FZF3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Ddx49Q4FZF3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx49Q4FZF3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Ddx49Q4FZF3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx49Q4FZF3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx49Q4FZF3 Gm15467-201ENSMUST00000120582 445 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms