Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne3Q4FZC9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne3Q4FZC9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Gm7370-201ENSMUST00000219471 767 ntBASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne3Q4FZC9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Syne3Q4FZC9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.52■□□□□ 0.39
Syne3Q4FZC9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syne3Q4FZC9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syne3Q4FZC9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syne3Q4FZC9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syne3Q4FZC9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms