Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38aQ4FK66 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Prpf38aQ4FK66 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf38aQ4FK66 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf38aQ4FK66 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf38aQ4FK66 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf38aQ4FK66 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Gm43347-201ENSMUST00000200226 580 ntBASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38aQ4FK66 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Prpf38aQ4FK66 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Gm44454-201ENSMUST00000198541 138 ntBASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38aQ4FK66 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38aQ4FK66 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38aQ4FK66 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms