Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shank3Q4ACU6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Shank3Q4ACU6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Gm8655-201ENSMUST00000221159 852 ntBASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank3Q4ACU6 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shank3Q4ACU6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Shank3Q4ACU6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank3Q4ACU6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.5■□□□□ 0.87
Shank3Q4ACU6 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.5■□□□□ 0.87
Shank3Q4ACU6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shank3Q4ACU6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms