Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp48Q3V0C5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp48Q3V0C5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.43■□□□□ 0.86
Usp48Q3V0C5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Gm8000-201ENSMUST00000188378 592 ntBASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Gm2213-201ENSMUST00000197485 688 ntBASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp48Q3V0C5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp48Q3V0C5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Gm12644-201ENSMUST00000119935 606 ntBASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp48Q3V0C5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp48Q3V0C5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Usp48Q3V0C5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp48Q3V0C5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Usp48Q3V0C5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Gm6376-201ENSMUST00000209407 580 ntBASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp48Q3V0C5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms