Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.16■□□□□ 0.5
Bbof1Q3V079 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Gm16061-201ENSMUST00000122167 857 ntBASIC18.16■□□□□ 0.5
Bbof1Q3V079 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Gm18958-201ENSMUST00000174258 762 ntBASIC18.16■□□□□ 0.5
Bbof1Q3V079 Mir5130-201ENSMUST00000175160 84 ntBASIC18.16■□□□□ 0.5
Bbof1Q3V079 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bbof1Q3V079 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.16■□□□□ 0.5
Bbof1Q3V079 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.15■□□□□ 0.5
Bbof1Q3V079 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.15■□□□□ 0.5
Bbof1Q3V079 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.15■□□□□ 0.5
Bbof1Q3V079 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bbof1Q3V079 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Bbof1Q3V079 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Bbof1Q3V079 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Gm13216-201ENSMUST00000117145 591 ntBASIC18.14■□□□□ 0.49
Bbof1Q3V079 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Gm45058-201ENSMUST00000205810 766 ntBASIC18.14■□□□□ 0.49
Bbof1Q3V079 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.14■□□□□ 0.49
Bbof1Q3V079 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bbof1Q3V079 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.13■□□□□ 0.49
Bbof1Q3V079 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Bbof1Q3V079 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bbof1Q3V079 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Bbof1Q3V079 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bbof1Q3V079 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bbof1Q3V079 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.12■□□□□ 0.49
Bbof1Q3V079 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bbof1Q3V079 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Bbof1Q3V079 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bbof1Q3V079 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms