Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrfip1Q3UZ39 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrfip1Q3UZ39 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrfip1Q3UZ39 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrfip1Q3UZ39 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrfip1Q3UZ39 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrfip1Q3UZ39 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lrrfip1Q3UZ39 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrfip1Q3UZ39 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Gm25016-201ENSMUST00000158399 131 ntBASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrfip1Q3UZ39 Haglr-201ENSMUST00000100000 2085 ntBASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Gm11336-201ENSMUST00000118168 334 ntBASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrfip1Q3UZ39 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrfip1Q3UZ39 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Lrrfip1Q3UZ39 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lrrfip1Q3UZ39 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Gm21362-201ENSMUST00000194272 928 ntBASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Gm18115-201ENSMUST00000221209 621 ntBASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.76■□□□□ 0.59
Lrrfip1Q3UZ39 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms