Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn4Q3UWL8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn4Q3UWL8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Gm37856-201ENSMUST00000191634 999 ntBASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn4Q3UWL8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfdn4Q3UWL8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfdn4Q3UWL8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfdn4Q3UWL8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfdn4Q3UWL8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.21■□□□□ 0.18
Pfdn4Q3UWL8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn4Q3UWL8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfdn4Q3UWL8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pfdn4Q3UWL8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms