Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Gm27459-201ENSMUST00000184860 107 ntBASIC17.35■□□□□ 0.37
Gm29609Q3UU56 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Gm43347-201ENSMUST00000200226 580 ntBASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Gm11452-201ENSMUST00000122376 690 ntBASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gm29609Q3UU56 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Gm29609Q3UU56 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Gm10576-201ENSMUST00000191927 825 ntBASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm29609Q3UU56 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Gm11355-201ENSMUST00000121120 306 ntBASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm29609Q3UU56 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Mir1668-201ENSMUST00000184114 107 ntBASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Gm7791-201ENSMUST00000219066 539 ntBASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm29609Q3UU56 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms