Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Arhgef40Q3UPH7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Arhgef40Q3UPH7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC24.26■■□□□ 1.47
Arhgef40Q3UPH7 Gm25911-201ENSMUST00000157621 56 ntBASIC24.26■■□□□ 1.47
Arhgef40Q3UPH7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Arhgef40Q3UPH7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Arhgef40Q3UPH7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Arhgef40Q3UPH7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Arhgef40Q3UPH7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Arhgef40Q3UPH7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Arhgef40Q3UPH7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Gm6184-201ENSMUST00000120403 1261 ntBASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Gm5682-201ENSMUST00000173402 505 ntBASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 AC159106.1-201ENSMUST00000224421 690 ntBASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Arhgef40Q3UPH7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Gm27646-201ENSMUST00000183989 110 ntBASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Arhgef40Q3UPH7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Gm3928-201ENSMUST00000121141 1307 ntBASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Gm37500-201ENSMUST00000192059 1443 ntBASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Gm9727-201ENSMUST00000161387 555 ntBASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Arhgef40Q3UPH7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Gm11841-201ENSMUST00000117060 1963 ntBASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Arhgef40Q3UPH7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC24.2■■□□□ 1.47
Arhgef40Q3UPH7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC24.2■■□□□ 1.47
Arhgef40Q3UPH7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC24.2■■□□□ 1.47
Arhgef40Q3UPH7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms