Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Gm6345-202ENSMUST00000180900 204 ntBASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cracr2aQ3UP38 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Gm13186-201ENSMUST00000118031 316 ntBASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cracr2aQ3UP38 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cracr2aQ3UP38 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cracr2aQ3UP38 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cracr2aQ3UP38 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.02■□□□□ 0.47
Cracr2aQ3UP38 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cracr2aQ3UP38 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cracr2aQ3UP38 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cracr2aQ3UP38 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cracr2aQ3UP38 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cracr2aQ3UP38 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18■□□□□ 0.47
Cracr2aQ3UP38 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18■□□□□ 0.47
Cracr2aQ3UP38 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cracr2aQ3UP38 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cracr2aQ3UP38 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cracr2aQ3UP38 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cracr2aQ3UP38 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Cracr2aQ3UP38 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cracr2aQ3UP38 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cracr2aQ3UP38 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cracr2aQ3UP38 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms