Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Naf1Q3UMQ8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Naf1Q3UMQ8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Gm7153-201ENSMUST00000117092 455 ntBASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Gm34391-201ENSMUST00000203706 907 ntBASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Naf1Q3UMQ8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Naf1Q3UMQ8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Naf1Q3UMQ8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Naf1Q3UMQ8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Naf1Q3UMQ8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms