Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrk1Q3UHC2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Gm24589-201ENSMUST00000116692 94 ntBASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrrk1Q3UHC2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.23■□□□□ 0.03
Lrrk1Q3UHC2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Gm43514-201ENSMUST00000198852 424 ntBASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Gm34391-201ENSMUST00000203706 907 ntBASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lrrk1Q3UHC2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrk1Q3UHC2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrk1Q3UHC2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrk1Q3UHC2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrk1Q3UHC2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Lrrk1Q3UHC2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.21■□□□□ 0.02
Lrrk1Q3UHC2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.21■□□□□ 0.02
Lrrk1Q3UHC2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrk1Q3UHC2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.21■□□□□ 0.02
Lrrk1Q3UHC2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.21■□□□□ 0.02
Lrrk1Q3UHC2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms