Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.78□□□□□ -0.2
Tff1Q08423 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Tff1Q08423 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tff1Q08423 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tff1Q08423 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tff1Q08423 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.78□□□□□ -0.2
Tff1Q08423 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.78□□□□□ -0.2
Tff1Q08423 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tff1Q08423 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tff1Q08423 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.78□□□□□ -0.2
Tff1Q08423 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Tff1Q08423 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
Tff1Q08423 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Tff1Q08423 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tff1Q08423 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Tff1Q08423 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Tff1Q08423 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.77□□□□□ -0.21
Tff1Q08423 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.77□□□□□ -0.21
Tff1Q08423 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.77□□□□□ -0.21
Tff1Q08423 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.77□□□□□ -0.21
Tff1Q08423 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Tff1Q08423 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tff1Q08423 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tff1Q08423 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tff1Q08423 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Tff1Q08423 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tff1Q08423 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Tff1Q08423 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.76□□□□□ -0.21
Tff1Q08423 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.76□□□□□ -0.21
Tff1Q08423 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tff1Q08423 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.76□□□□□ -0.21
Tff1Q08423 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Tff1Q08423 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.76□□□□□ -0.21
Tff1Q08423 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tff1Q08423 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tff1Q08423 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Tff1Q08423 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Gm24841-201ENSMUST00000158676 357 ntBASIC13.75□□□□□ -0.21
Tff1Q08423 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.75□□□□□ -0.21
Tff1Q08423 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.75□□□□□ -0.21
Tff1Q08423 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tff1Q08423 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms