Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdx4Q07424 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cdx4Q07424 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdx4Q07424 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdx4Q07424 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdx4Q07424 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdx4Q07424 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Gm17661-201ENSMUST00000170317 270 ntBASIC12.81□□□□□ -0.36
Cdx4Q07424 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.81□□□□□ -0.36
Cdx4Q07424 Gm45058-201ENSMUST00000205810 766 ntBASIC12.81□□□□□ -0.36
Cdx4Q07424 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdx4Q07424 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdx4Q07424 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdx4Q07424 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdx4Q07424 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdx4Q07424 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx4Q07424 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.8□□□□□ -0.36
Cdx4Q07424 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Gm9731-201ENSMUST00000209480 747 ntBASIC12.8□□□□□ -0.36
Cdx4Q07424 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cdx4Q07424 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdx4Q07424 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.8□□□□□ -0.36
Cdx4Q07424 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx4Q07424 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdx4Q07424 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdx4Q07424 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdx4Q07424 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cdx4Q07424 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.79□□□□□ -0.36
Cdx4Q07424 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdx4Q07424 Gm18101-201ENSMUST00000215769 548 ntBASIC12.79□□□□□ -0.36
Cdx4Q07424 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cdx4Q07424 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cdx4Q07424 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdx4Q07424 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdx4Q07424 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx4Q07424 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdx4Q07424 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx4Q07424 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx4Q07424 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cdx4Q07424 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms