Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Taf1aP97357 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.32■□□□□ 0.04
Taf1aP97357 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
Taf1aP97357 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.32■□□□□ 0.04
Taf1aP97357 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Taf1aP97357 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.32■□□□□ 0.04
Taf1aP97357 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.32■□□□□ 0.04
Taf1aP97357 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.32■□□□□ 0.04
Taf1aP97357 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
Taf1aP97357 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.32■□□□□ 0.04
Taf1aP97357 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Taf1aP97357 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Taf1aP97357 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Taf1aP97357 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Taf1aP97357 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.31■□□□□ 0.04
Taf1aP97357 Gm27000-201ENSMUST00000182943 842 ntBASIC15.31■□□□□ 0.04
Taf1aP97357 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Taf1aP97357 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1aP97357 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Taf1aP97357 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.3■□□□□ 0.04
Taf1aP97357 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.3■□□□□ 0.04
Taf1aP97357 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.3■□□□□ 0.04
Taf1aP97357 Gm9731-201ENSMUST00000209480 747 ntBASIC15.3■□□□□ 0.04
Taf1aP97357 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1aP97357 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.29■□□□□ 0.04
Taf1aP97357 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Taf1aP97357 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Taf1aP97357 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.29■□□□□ 0.04
Taf1aP97357 Gm37856-201ENSMUST00000191634 999 ntBASIC15.29■□□□□ 0.04
Taf1aP97357 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.29■□□□□ 0.04
Taf1aP97357 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Taf1aP97357 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1aP97357 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Taf1aP97357 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Taf1aP97357 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1aP97357 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1aP97357 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1aP97357 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1aP97357 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Taf1aP97357 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1aP97357 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Taf1aP97357 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Taf1aP97357 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1aP97357 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.28■□□□□ 0.04
Taf1aP97357 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.28■□□□□ 0.04
Taf1aP97357 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1aP97357 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1aP97357 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms