Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h3bP84228 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.52□□□□□ -0.08
Hist1h3bP84228 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.52□□□□□ -0.08
Hist1h3bP84228 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h3bP84228 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h3bP84228 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h3bP84228 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h3bP84228 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Hist1h3bP84228 Actl10-202ENSMUST00000226583 1501 ntBASIC14.52□□□□□ -0.08
Hist1h3bP84228 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h3bP84228 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.52□□□□□ -0.08
Hist1h3bP84228 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.52□□□□□ -0.08
Hist1h3bP84228 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.52□□□□□ -0.08
Hist1h3bP84228 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.52□□□□□ -0.09
Hist1h3bP84228 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h3bP84228 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hist1h3bP84228 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.5□□□□□ -0.09
Hist1h3bP84228 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.5□□□□□ -0.09
Hist1h3bP84228 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Gm10252-201ENSMUST00000209541 832 ntBASIC14.5□□□□□ -0.09
Hist1h3bP84228 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Gm18115-201ENSMUST00000221209 621 ntBASIC14.5□□□□□ -0.09
Hist1h3bP84228 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.5□□□□□ -0.09
Hist1h3bP84228 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms