Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.26□□□□□ -0.13
Ufd1P70362 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ufd1P70362 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.26□□□□□ -0.13
Ufd1P70362 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ufd1P70362 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ufd1P70362 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.26□□□□□ -0.13
Ufd1P70362 Mir2861-201ENSMUST00000175539 82 ntBASIC14.26□□□□□ -0.13
Ufd1P70362 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.26□□□□□ -0.13
Ufd1P70362 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ufd1P70362 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Ufd1P70362 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ufd1P70362 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ufd1P70362 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ufd1P70362 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.25□□□□□ -0.13
Ufd1P70362 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Gm2399-201ENSMUST00000104944 225 ntBASIC14.25□□□□□ -0.13
Ufd1P70362 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.25□□□□□ -0.13
Ufd1P70362 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ufd1P70362 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ufd1P70362 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.25□□□□□ -0.13
Ufd1P70362 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.25□□□□□ -0.13
Ufd1P70362 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ufd1P70362 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ufd1P70362 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.25□□□□□ -0.13
Ufd1P70362 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
Ufd1P70362 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ufd1P70362 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ufd1P70362 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ufd1P70362 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.24□□□□□ -0.13
Ufd1P70362 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ufd1P70362 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.24□□□□□ -0.13
Ufd1P70362 Gm42778-201ENSMUST00000199644 553 ntBASIC14.24□□□□□ -0.13
Ufd1P70362 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ufd1P70362 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Ufd1P70362 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ufd1P70362 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ufd1P70362 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ufd1P70362 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ufd1P70362 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ufd1P70362 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ufd1P70362 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ufd1P70362 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ufd1P70362 Zfp783-201ENSMUST00000095946 670 ntBASIC14.23□□□□□ -0.13
Ufd1P70362 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ufd1P70362 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ufd1P70362 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ufd1P70362 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ufd1P70362 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ufd1P70362 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ufd1P70362 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ufd1P70362 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ufd1P70362 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ufd1P70362 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ufd1P70362 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ufd1P70362 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ufd1P70362 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ufd1P70362 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ufd1P70362 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ufd1P70362 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ufd1P70362 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ufd1P70362 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms