Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sem1P60897 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sem1P60897 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sem1P60897 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sem1P60897 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sem1P60897 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.71■□□□□ 0.11
Sem1P60897 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.71■□□□□ 0.11
Sem1P60897 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Sem1P60897 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.71■□□□□ 0.11
Sem1P60897 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sem1P60897 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Sem1P60897 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Sem1P60897 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sem1P60897 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sem1P60897 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Sem1P60897 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sem1P60897 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Sem1P60897 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.7■□□□□ 0.1
Sem1P60897 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.7■□□□□ 0.1
Sem1P60897 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sem1P60897 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.7■□□□□ 0.1
Sem1P60897 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Sem1P60897 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sem1P60897 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sem1P60897 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.69■□□□□ 0.1
Sem1P60897 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.69■□□□□ 0.1
Sem1P60897 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sem1P60897 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sem1P60897 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.68■□□□□ 0.1
Sem1P60897 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Sem1P60897 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.68■□□□□ 0.1
Sem1P60897 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms