Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33bP59016 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33bP59016 Gm17271-201ENSMUST00000165535 355 ntBASIC20.86■□□□□ 0.93
Vps33bP59016 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33bP59016 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.86■□□□□ 0.93
Vps33bP59016 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33bP59016 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.86■□□□□ 0.93
Vps33bP59016 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33bP59016 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33bP59016 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Vps33bP59016 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33bP59016 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33bP59016 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33bP59016 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.85■□□□□ 0.93
Vps33bP59016 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Vps33bP59016 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps33bP59016 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Vps33bP59016 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps33bP59016 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps33bP59016 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps33bP59016 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps33bP59016 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Vps33bP59016 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps33bP59016 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.84■□□□□ 0.93
Vps33bP59016 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Vps33bP59016 Gm27300-201ENSMUST00000184085 97 ntBASIC20.84■□□□□ 0.93
Vps33bP59016 Gm27335-201ENSMUST00000184758 97 ntBASIC20.84■□□□□ 0.93
Vps33bP59016 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps33bP59016 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.84■□□□□ 0.93
Vps33bP59016 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Vps33bP59016 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps33bP59016 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps33bP59016 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps33bP59016 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps33bP59016 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps33bP59016 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vps33bP59016 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps33bP59016 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps33bP59016 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps33bP59016 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Vps33bP59016 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.82■□□□□ 0.92
Vps33bP59016 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.82■□□□□ 0.92
Vps33bP59016 Mir6956-201ENSMUST00000183598 62 ntBASIC20.82■□□□□ 0.92
Vps33bP59016 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.82■□□□□ 0.92
Vps33bP59016 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.82■□□□□ 0.92
Vps33bP59016 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.82■□□□□ 0.92
Vps33bP59016 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Vps33bP59016 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps33bP59016 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.81■□□□□ 0.92
Vps33bP59016 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.81■□□□□ 0.92
Vps33bP59016 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps33bP59016 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Vps33bP59016 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps33bP59016 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.81■□□□□ 0.92
Vps33bP59016 Gm37153-201ENSMUST00000193637 231 ntBASIC20.81■□□□□ 0.92
Vps33bP59016 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps33bP59016 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps33bP59016 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps33bP59016 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps33bP59016 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.8■□□□□ 0.92
Vps33bP59016 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.8■□□□□ 0.92
Vps33bP59016 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vps33bP59016 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.8■□□□□ 0.92
Vps33bP59016 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Gm45167-201ENSMUST00000208007 322 ntBASIC20.8■□□□□ 0.92
Vps33bP59016 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps33bP59016 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps33bP59016 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps33bP59016 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms