Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.14■□□□□ 0.18
Cdh5P55284 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh5P55284 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh5P55284 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh5P55284 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.14■□□□□ 0.17
Cdh5P55284 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.14■□□□□ 0.17
Cdh5P55284 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cdh5P55284 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.14■□□□□ 0.17
Cdh5P55284 Gm4974-201ENSMUST00000209974 875 ntBASIC16.14■□□□□ 0.17
Cdh5P55284 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 Gm9987-201ENSMUST00000069768 567 ntBASIC16.14■□□□□ 0.17
Cdh5P55284 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdh5P55284 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh5P55284 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdh5P55284 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cdh5P55284 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cdh5P55284 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.13■□□□□ 0.17
Cdh5P55284 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.13■□□□□ 0.17
Cdh5P55284 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.13■□□□□ 0.17
Cdh5P55284 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.13■□□□□ 0.17
Cdh5P55284 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cdh5P55284 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh5P55284 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh5P55284 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh5P55284 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Cdh5P55284 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh5P55284 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh5P55284 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Cdh5P55284 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cdh5P55284 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh5P55284 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cdh5P55284 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.12■□□□□ 0.17
Cdh5P55284 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdh5P55284 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cdh5P55284 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cdh5P55284 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdh5P55284 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh5P55284 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh5P55284 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cdh5P55284 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh5P55284 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh5P55284 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.11■□□□□ 0.17
Cdh5P55284 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.11■□□□□ 0.17
Cdh5P55284 Gm11539-201ENSMUST00000119837 557 ntBASIC16.11■□□□□ 0.17
Cdh5P55284 Gm13436-201ENSMUST00000120418 567 ntBASIC16.11■□□□□ 0.17
Cdh5P55284 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cdh5P55284 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh5P55284 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms