Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Sox3P53784 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox3P53784 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sox3P53784 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sox3P53784 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox3P53784 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sox3P53784 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sox3P53784 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sox3P53784 Olfr129-201ENSMUST00000122318 993 ntBASIC15.8■□□□□ 0.12
Sox3P53784 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.8■□□□□ 0.12
Sox3P53784 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.8■□□□□ 0.12
Sox3P53784 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.8■□□□□ 0.12
Sox3P53784 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.8■□□□□ 0.12
Sox3P53784 Gm45328-201ENSMUST00000210942 917 ntBASIC15.8■□□□□ 0.12
Sox3P53784 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Sox3P53784 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox3P53784 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.79■□□□□ 0.12
Sox3P53784 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sox3P53784 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Gm26039-201ENSMUST00000158152 144 ntBASIC15.79■□□□□ 0.12
Sox3P53784 Gm24841-201ENSMUST00000158676 357 ntBASIC15.79■□□□□ 0.12
Sox3P53784 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.79■□□□□ 0.12
Sox3P53784 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.79■□□□□ 0.12
Sox3P53784 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sox3P53784 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox3P53784 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.78■□□□□ 0.12
Sox3P53784 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Sox3P53784 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.78■□□□□ 0.12
Sox3P53784 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sox3P53784 Gm18206-201ENSMUST00000207027 926 ntBASIC15.78■□□□□ 0.12
Sox3P53784 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sox3P53784 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Sox3P53784 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
Sox3P53784 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.77■□□□□ 0.12
Sox3P53784 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Sox3P53784 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.77■□□□□ 0.12
Sox3P53784 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 Gm43347-201ENSMUST00000200226 580 ntBASIC15.77■□□□□ 0.12
Sox3P53784 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox3P53784 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms