Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Sox1P53783 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.88■□□□□ 0.29
Sox1P53783 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.88■□□□□ 0.29
Sox1P53783 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.88■□□□□ 0.29
Sox1P53783 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.88■□□□□ 0.29
Sox1P53783 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.88■□□□□ 0.29
Sox1P53783 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sox1P53783 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.88■□□□□ 0.29
Sox1P53783 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.88■□□□□ 0.29
Sox1P53783 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.88■□□□□ 0.29
Sox1P53783 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Sox1P53783 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.87■□□□□ 0.29
Sox1P53783 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sox1P53783 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.87■□□□□ 0.29
Sox1P53783 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sox1P53783 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sox1P53783 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox1P53783 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.86■□□□□ 0.29
Sox1P53783 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sox1P53783 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.86■□□□□ 0.29
Sox1P53783 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.86■□□□□ 0.29
Sox1P53783 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.86■□□□□ 0.29
Sox1P53783 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Sox1P53783 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox1P53783 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.85■□□□□ 0.29
Sox1P53783 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.85■□□□□ 0.29
Sox1P53783 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.85■□□□□ 0.29
Sox1P53783 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sox1P53783 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sox1P53783 Gm5312-201ENSMUST00000203728 547 ntBASIC16.85■□□□□ 0.29
Sox1P53783 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.85■□□□□ 0.29
Sox1P53783 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sox1P53783 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.85■□□□□ 0.29
Sox1P53783 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox1P53783 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sox1P53783 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 Gm12497-201ENSMUST00000138778 237 ntBASIC16.84■□□□□ 0.29
Sox1P53783 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.84■□□□□ 0.29
Sox1P53783 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.84■□□□□ 0.29
Sox1P53783 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sox1P53783 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sox1P53783 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox1P53783 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox1P53783 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms