Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Ccl9P51670 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl9P51670 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccl9P51670 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccl9P51670 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccl9P51670 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccl9P51670 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.54□□□□□ -0.08
Ccl9P51670 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ccl9P51670 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.54□□□□□ -0.08
Ccl9P51670 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccl9P51670 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl9P51670 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccl9P51670 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccl9P51670 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccl9P51670 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccl9P51670 Gm18958-201ENSMUST00000174258 762 ntBASIC14.53□□□□□ -0.08
Ccl9P51670 Gm22240-201ENSMUST00000175225 82 ntBASIC14.53□□□□□ -0.08
Ccl9P51670 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.53□□□□□ -0.08
Ccl9P51670 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.53□□□□□ -0.08
Ccl9P51670 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.53□□□□□ -0.08
Ccl9P51670 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Gm10812-201ENSMUST00000099864 546 ntBASIC14.53□□□□□ -0.08
Ccl9P51670 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Ccl9P51670 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ccl9P51670 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ccl9P51670 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccl9P51670 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccl9P51670 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl9P51670 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl9P51670 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ccl9P51670 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccl9P51670 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl9P51670 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl9P51670 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.52□□□□□ -0.09
Ccl9P51670 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccl9P51670 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccl9P51670 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl9P51670 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccl9P51670 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccl9P51670 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ccl9P51670 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms