Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SftpbP50405 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SftpbP50405 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SftpbP50405 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SftpbP50405 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.96■□□□□ 0.31
SftpbP50405 Mir1199-201ENSMUST00000117015 119 ntBASIC16.96■□□□□ 0.31
SftpbP50405 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.96■□□□□ 0.31
SftpbP50405 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.96■□□□□ 0.31
SftpbP50405 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SftpbP50405 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SftpbP50405 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SftpbP50405 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SftpbP50405 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SftpbP50405 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SftpbP50405 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.96■□□□□ 0.3
SftpbP50405 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SftpbP50405 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SftpbP50405 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
SftpbP50405 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.95■□□□□ 0.3
SftpbP50405 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.95■□□□□ 0.3
SftpbP50405 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.95■□□□□ 0.3
SftpbP50405 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.95■□□□□ 0.3
SftpbP50405 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.95■□□□□ 0.3
SftpbP50405 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.95■□□□□ 0.3
SftpbP50405 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SftpbP50405 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SftpbP50405 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.94■□□□□ 0.3
SftpbP50405 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SftpbP50405 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Gm18958-201ENSMUST00000174258 762 ntBASIC16.94■□□□□ 0.3
SftpbP50405 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.94■□□□□ 0.3
SftpbP50405 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SftpbP50405 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SftpbP50405 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SftpbP50405 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.93■□□□□ 0.3
SftpbP50405 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SftpbP50405 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SftpbP50405 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SftpbP50405 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.93■□□□□ 0.3
SftpbP50405 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SftpbP50405 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.93■□□□□ 0.3
SftpbP50405 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SftpbP50405 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms