Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.79■□□□□ 0.28
Vps4bP46467 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Vps4bP46467 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.78■□□□□ 0.28
Vps4bP46467 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.78■□□□□ 0.28
Vps4bP46467 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.78■□□□□ 0.28
Vps4bP46467 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.78■□□□□ 0.28
Vps4bP46467 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Vps4bP46467 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Vps4bP46467 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.78■□□□□ 0.28
Vps4bP46467 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vps4bP46467 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Vps4bP46467 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps4bP46467 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Vps4bP46467 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.77■□□□□ 0.28
Vps4bP46467 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Gm27463-201ENSMUST00000183569 57 ntBASIC16.77■□□□□ 0.28
Vps4bP46467 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.77■□□□□ 0.28
Vps4bP46467 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.77■□□□□ 0.28
Vps4bP46467 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps4bP46467 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Vps4bP46467 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps4bP46467 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Vps4bP46467 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps4bP46467 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.77■□□□□ 0.27
Vps4bP46467 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps4bP46467 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps4bP46467 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.77■□□□□ 0.27
Vps4bP46467 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps4bP46467 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps4bP46467 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.76■□□□□ 0.27
Vps4bP46467 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.76■□□□□ 0.27
Vps4bP46467 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.76■□□□□ 0.27
Vps4bP46467 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.76■□□□□ 0.27
Vps4bP46467 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Gm21814-202ENSMUST00000203277 873 ntBASIC16.76■□□□□ 0.27
Vps4bP46467 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Vps4bP46467 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vps4bP46467 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps4bP46467 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.75■□□□□ 0.27
Vps4bP46467 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vps4bP46467 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.75■□□□□ 0.27
Vps4bP46467 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vps4bP46467 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Gm9987-201ENSMUST00000069768 567 ntBASIC16.75■□□□□ 0.27
Vps4bP46467 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms